{"id":162,"date":"2015-12-10T17:01:57","date_gmt":"2015-12-10T08:01:57","guid":{"rendered":"http:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/?page_id=162"},"modified":"2015-12-18T13:52:53","modified_gmt":"2015-12-18T04:52:53","slug":"c%e8%a8%80%e8%aa%9e%e8%ac%9b%e5%ba%a7%e3%80%80%e7%ac%ac%ef%bc%91%ef%bc%91%e5%9b%9e","status":"publish","type":"page","link":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/?page_id=162","title":{"rendered":"C\u8a00\u8a9e\u8b1b\u5ea7\u3000\u7b2c\uff11\uff11\u56de"},"content":{"rendered":"<h2>\u30e1\u30e2\u30ea\u306e\u52d5\u7684\u78ba\u4fdd<\/h2>\n<p>\u524d\u56de\u3001\u524d\u3005\u56de\u306b\u4f5c\u3063\u305f\u30d7\u30ed\u30b0\u30e9\u30e0\u306f\u3001\u8aad\u307f\u8fbc\u3081\u308b\u30c7\u30fc\u30bf\u306e\u4e0a\u9650\u3092\u306f\u3058\u3081\u304b\u3089\u6c7a\u3081\u3066\u3044\u307e\u3057\u305f\uff08\u63a5\u89e6\u539f\u5b50\u306e\u8a08\u7b97\u3067\u306f5000\u539f\u5b50\u307e\u3067\u3001hydropathy plot\u3067\u306f2000\u30a2\u30df\u30ce\u9178\u6b8b\u57fa\u307e\u3067\uff09\u3002\u6271\u3063\u3066\u3044\u308b\u30c7\u30fc\u30bf\u304c\u3042\u308b\u7a0b\u5ea6\u6c7a\u307e\u3063\u3066\u3044\u308b\u5834\u5408\u306f\u3053\u306e\u307e\u307e\u3067\u3082\u3044\u3044\u306e\u3067\u3059\u304c\u3001PDB\u306b\u767b\u9332\u3055\u308c\u3066\u3044\u308b\u30c7\u30fc\u30bf\u5168\u90e8\u3084\u30b2\u30ce\u30e0\u306b\u30b3\u30fc\u30c9\u3055\u308c\u3066\u3044\u308b\u30bf\u30f3\u30d1\u30af\u8cea\u5168\u90e8\u3092\u6271\u3046\u3088\u3046\u306a\u5834\u5408\u3001\u3053\u306e\u4e0a\u9650\u3092\u8d85\u3048\u3066\u3057\u307e\u3046\u53ef\u80fd\u6027\u304c\u3042\u308a\u307e\u3059\u3002<\/p>\n<p>\u5bfe\u7b56\u306e\uff11\u3064\u3068\u3057\u3066\u59cb\u3081\u304b\u3089\u4e0a\u9650\u3092\u5927\u304d\u304f\u3057\u3066\u304a\u304f\u3068\u3044\u3046\u65b9\u6cd5\u304c\u3042\u308a\u307e\u3059\uff08\u63a5\u89e6\u539f\u5b50\u306e\u8a08\u7b97\u30d7\u30ed\u30b0\u30e9\u30e0\u3092\u4f8b\u3068\u3059\u308b\u3068\u3001#define\u884c\u306eMAXATOM\u3067\u6307\u5b9a\u3057\u305f5000\u3068\u3044\u3046\u6570\u5b57\u309210000\u306b\u3059\u308c\u3070\u300110000\u539f\u5b50\u307e\u3067\u8aad\u307f\u8fbc\u3081\u308b\u3088\u3046\u306b\u306a\u308a\u307e\u3059\uff09\u3002\u305f\u3060\u3053\u306e\u65b9\u6cd5\u3060\u3068\u3001\u3055\u3089\u306b\u5927\u304d\u306a\u30c7\u30fc\u30bf\u304c\u51fa\u3066\u304d\u305f\u5834\u5408\u306b\u307e\u305f\u30d7\u30ed\u30b0\u30e9\u30e0\u3092\u5909\u66f4\u3059\u308b\u5fc5\u8981\u304c\u3067\u3066\u304f\u308b\u3057\u3001\u30d7\u30ed\u30b0\u30e9\u30e0\u3092\u52d5\u304b\u3059\u305f\u3073\u306b\u7121\u99c4\u306b\u5927\u304d\u306a\u30e1\u30e2\u30ea\u304c\u4f7f\u308f\u308c\u3066\u3057\u307e\u3046\u306e\u3067\u3001\u3042\u307e\u308a\u52b9\u7387\u7684\u3067\u306f\u3042\u308a\u307e\u305b\u3093\u3002<\/p>\n<p>\u305d\u3053\u3067\u3001\u4eca\u56de\u306f\u8aad\u307f\u8fbc\u3081\u308b\u30c7\u30fc\u30bf\u306e\u5927\u304d\u3055\u3092\u52d5\u7684\u306b\uff08\u8aad\u307f\u8fbc\u3080\u30c7\u30fc\u30bf\u306b\u3042\u308f\u305b\u3066\uff09\u5909\u3048\u308b\u65b9\u6cd5\u3092\u7d39\u4ecb\u3057\u307e\u3059\u3002\u4eca\u56de\u7d39\u4ecb\u3059\u308b\u65b9\u6cd5\u3092\u4f7f\u3048\u3070\u3001\u5efa\u524d\u4e0a\u306f\u30b3\u30f3\u30d4\u30e5\u30fc\u30bf\u304c\u6301\u3063\u3066\u3044\u308b\u30e1\u30e2\u30ea\u3092\u4e0a\u9650\u3068\u3057\u3066\u30c7\u30fc\u30bf\u3092\u8aad\u307f\u8fbc\u3080\u3053\u3068\u304c\u3067\u304d\u307e\u3059\u3002<\/p>\n<p>\u30e1\u30e2\u30ea\u3092\u52d5\u7684\u306b\u78ba\u4fdd\u3059\u308b\u306b\u306f\u3001\u3059\u3067\u306b\u540d\u524d\u306f\u51fa\u3066\u304d\u3066\u3044\u308bmalloc()\u95a2\u6570\u3092\u4f7f\u3044\u307e\u3059\u3002\u4ee5\u4e0b\u306bmalloc()\u95a2\u6570\u3092\u4f7f\u3063\u305f\u7c21\u5358\u306a\u30d7\u30ed\u30b0\u30e9\u30e0\u4f8b\u3092\u793a\u3057\u307e\u3059\u3002\u30d7\u30ed\u30b0\u30e9\u30e0\u306e\u6a5f\u80fd\u3068\u3057\u3066\u306f\u30011\u304b\u308910\u3092\u9806\u756a\u306b\u8868\u793a\u3059\u308b\u3068\u3044\u3046\u3082\u306e\u3067\u3059\u3002<\/p>\n<pre class=\"brush: cpp; title: ; notranslate\" title=\"\">\r\n#include &lt;stdio.h&gt;\r\n#include &lt;stdlib.h&gt;\r\n\r\nint main()\r\n{\r\n    int   *a;\r\n    int    i;\r\n \r\n    a = (int *)malloc(10 * sizeof(int));\r\n \r\n    for (i = 0; i &lt; 10; i++) {\r\n        a&#x5B;i] = i+1;\r\n    }\r\n\r\n    for (i = 0; i &lt; 10; i++) {\r\n        printf(&quot;%d\\n&quot;, a&#x5B;i]);\r\n    }\r\n}\r\n<\/pre>\n<p>\u30bd\u30fc\u30b9\u30b3\u30fc\u30c9\u306e\u30d5\u30a1\u30a4\u30eb\u540d\u3092ex_malloc.c\u3068\u3067\u3082\u3057\u3066\u3001\u30b3\u30f3\u30d1\u30a4\u30eb\u3057\u307e\u3057\u3087\u3046\u3002<\/p>\n<pre>\r\n cc -o ex_malloc ex_malloc.c\r\n<\/pre>\n<p>\u3067\u5927\u4e08\u592b\u3067\u3059\u3002<\/p>\n<p>\u307e\u305a\u3001malloc()\u95a2\u6570\u3092\u4f7f\u3046\u305f\u3081\u306b\u30012\u884c\u76ee\u306b\u3042\u308b\u3088\u3046\u306bstdlib.h\u3092include\u3057\u3066\u304a\u304d\u307e\u3057\u3087\u3046\u3002<\/p>\n<p>6\u884c\u76ee\u3067int\u578b\u306e\u30dd\u30a4\u30f3\u30bf\u5909\u6570a\u3092\u5ba3\u8a00\u3057\u3066\u3044\u307e\u3059\u3002\u30dd\u30a4\u30f3\u30bf\u5909\u6570\u306a\u306e\u3067\u3001\u3042\u304f\u307e\u3067\u3082\u30e1\u30e2\u30ea\u306e\u756a\u5730\u304c\u5165\u308b\u5909\u6570\u3067\u3042\u308a\u3001\u3053\u306e\u5ba3\u8a00\u3060\u3051\u3067\u306f\u5b9f\u969b\u306b\u30c7\u30fc\u30bf\u3092\u5165\u308c\u308b\u3053\u3068\u304c\u3067\u304d\u308b\u5834\u6240\uff08\u30e1\u30e2\u30ea\uff09\u306f\u78ba\u4fdd\u3055\u308c\u3066\u3044\u307e\u305b\u3093\uff08\u3053\u306e\u8fba\u306f\u7b2c\uff13\u56de\u3067\u51fa\u3066\u304d\u305f\u8a71\u3068\u5fae\u5999\u306b\u9055\u3046\u306e\u3067\u6ce8\u610f\uff09\u3002<\/p>\n<p>9\u884c\u76ee\u304c\u554f\u984c\u306emalloc()\u95a2\u6570\u3092\u4f7f\u3063\u3066\u3044\u308b\u3068\u3053\u308d\u3067\u3059\u3002\u3053\u306emalloc()\u95a2\u6570\u3092\u4f7f\u3046\u3053\u3068\u3067\u3001\u30c7\u30fc\u30bf\u3092\u5165\u308c\u308b\u5834\u6240\u304c\u78ba\u4fdd\u3055\u308c\u305f\u30e1\u30e2\u30ea\u306e\u756a\u5730\u304c\u30dd\u30a4\u30f3\u30bf\u5909\u6570a\u306b\u4ee3\u5165\u3055\u308c\u307e\u3059\u3002\u30dd\u30a4\u30f3\u30bf\u5909\u6570a\u304cint\u578b\u306e\u30dd\u30a4\u30f3\u30bf\u306a\u306e\u3067\u3001malloc()\u95a2\u6570\u306e\u524d\u306b\u3001(int *)\u3092\u3064\u3051\u308b\u5fc5\u8981\u304c\u3042\u308a\u307e\u3059\u3002\u307e\u305f\u3001malloc()\u95a2\u6570\u306b\u6e21\u3059\u5f15\u6570\u306f\u3001\u78ba\u4fdd\u3059\u308b\u9818\u57df\u306e\u5927\u304d\u3055\u306b\u306a\u308a\u307e\u3059\u3002\u3053\u306e\u5834\u5408\u300110 * sizeof(int)\u3068\u306a\u3063\u3066\u3044\u308b\u306e\u3067\u3001\u201dint\u578b\u306e\u30c7\u30fc\u30bf\u201d\u304c\u201d10\u500b\u5206\u201d\u5165\u308b\u5927\u304d\u3055\u3068\u3044\u3046\u610f\u5473\u306b\u306a\u308a\u307e\u3059\u3002\u3082\u3057\u30dd\u30a4\u30f3\u30bf\u5909\u6570a\u304cchar\u578b\u3067\u3042\u308a\u30011000\u6587\u5b57\u5206\u306e\u9818\u57df\u3092\u78ba\u4fdd\u3059\u308b\u306e\u3067\u3042\u308c\u3070\u3001<\/p>\n<pre class=\"brush: cpp; light: true; title: ; notranslate\" title=\"\">\r\n a = (char *)malloc(1000 * sizeof(char))\r\n<\/pre>\n<p>\u3068\u306a\u308a\u307e\u3059\u3002<\/p>\n<p>10\u884c\u76ee\u4ee5\u964d\u306f\u5358\u306b\u3001\u78ba\u4fdd\u3057\u305f\u9818\u57df\u306b1\u304b\u308910\u306e\u6570\u5b57\u3092\u4ee3\u5165\u3057\u3066\u3001\u305d\u308c\u3092\u51fa\u529b\u3057\u3066\u3044\u308b\u3060\u3051\u3067\u3059\u3002<\/p>\n<p>\u4eca\u306e\u30d7\u30ed\u30b0\u30e9\u30e0\u4f8b\u3067\u306f\u3001\u78ba\u4fdd\u3059\u308b\u30e1\u30e2\u30ea\u306e\u91cf\u3092\u3042\u3089\u304b\u3058\u3081\u6c7a\u3081\u3066\u3044\u305f\u306e\u3067\u3001\u3042\u308b\u610f\u5473\u3053\u308c\u307e\u3067\u306b\u4f5c\u3063\u3066\u304d\u305f\u30d7\u30ed\u30b0\u30e9\u30e0\u3068\u5909\u308f\u3063\u3066\u3044\u307e\u305b\u3093\u3002\u5b9f\u969b\u306b\u30e1\u30e2\u30ea\u3092\u52d5\u7684\u306b\u78ba\u4fdd\u3059\u308b\u5834\u5408\u306f\u3001\u30d7\u30ed\u30b0\u30e9\u30e0\u306e\u4e2d\u3067\u5fc5\u8981\u306a\u30e1\u30e2\u30ea\u306e\u5927\u304d\u3055\u3092\u6c42\u3081\u308b\u3068\u3044\u3046\u30d7\u30ed\u30bb\u30b9\u304c\u5165\u308a\u307e\u3059\u3002<\/p>\n<h3>\u5b9f\u8df5\u7de8<\/h3>\n<p>PDB\u306e\u30c7\u30fc\u30bf\u3092\u4f7f\u3063\u3066\u3001\u30e1\u30e2\u30ea\u3092\u52d5\u7684\u306b\u78ba\u4fdd\u3059\u308b\u30d7\u30ed\u30b0\u30e9\u30e0\u3092\u5b9f\u969b\u306b\u4f5c\u3063\u3066\u307f\u307e\u3057\u3087\u3046\u3002\u30d7\u30ed\u30b0\u30e9\u30e0\u306e\u6a5f\u80fd\u306f\u3001\u30bf\u30f3\u30d1\u30af\u8cea\u4e3b\u9396\u306e\u914d\u5217\u4e0a\u96a3\u308a\u5408\u3046\u03b1\u70ad\u7d20\u9593\u306e\u8ddd\u96e2\u3092\u6c42\u3081\u3066\u8868\u793a\u3059\u308b\u3068\u3044\u3046\u3082\u306e\u3067\u3059\u3002<\/p>\n<p>\u30d7\u30ed\u30b0\u30e9\u30e0\u306e\u4e2d\u3067\u5fc5\u8981\u306a\u624b\u9806\u306f\u3001<\/p>\n<ul>\n<li>PDB\u306e\u30d5\u30a1\u30a4\u30eb\u3092\u958b\u304f\u3002<\/li>\n<li>PDB\u306e\u30d5\u30a1\u30a4\u30eb\u4e2d\u306b\u3042\u308b\u03b1\u70ad\u7d20\u306e\u6570\u3092\u6570\u3048\u308b\u3002<\/li>\n<li>\u03b1\u70ad\u7d20\u306e\u539f\u5b50\u5ea7\u6a19\u3092\u683c\u7d0d\u3059\u308b\u30e1\u30e2\u30ea\u3092\u78ba\u4fdd\u3059\u308b\u3002<\/li>\n<li>\u03b1\u70ad\u7d20\u306e\u539f\u5b50\u5ea7\u6a19\u3092\u8aad\u307f\u8fbc\u3080\u3002<\/li>\n<li>\u03b1\u70ad\u7d20\u9593\u306e\u8ddd\u96e2\u3092\u9806\u756a\u306b\u8a08\u7b97\u3057\u3001\u51fa\u529b\u3059\u308b\u3002<\/li>\n<\/ul>\n<p>\u3068\u3044\u3063\u305f\u3068\u3053\u308d\u3067\u3057\u3087\u3046\u304b\u3002\u3053\u308c\u3089\u306e\u624b\u9806\u3092\u3067\u304d\u308b\u3060\u3051\u95a2\u6570\u5316\u3057\u3066\u30d7\u30ed\u30b0\u30e9\u30e0\u5316\u3059\u308b\u3068\u4ee5\u4e0b\u306e\u3088\u3046\u306b\u66f8\u3051\u307e\u3059\u3002<\/p>\n<pre class=\"brush: cpp; title: ; notranslate\" title=\"\">\r\n#include &lt;stdio.h&gt;\r\n#include &lt;string.h&gt;\r\n#include &lt;stdlib.h&gt;\r\n#include &lt;math.h&gt;\r\n\r\n#define MAXCHR  128\r\n\r\nint GetAtomNum(FILE *fp)\r\n{\r\n    int     atomNum;\r\n    char    line&#x5B;MAXCHR];\r\n\r\n    while (fgets(line, MAXCHR, fp) != NULL) {\r\n        if (strncmp(line, &quot;ATOM  &quot;, 6) == 0 &amp;&amp;\r\n            strncmp(&amp;line&#x5B;12], &quot; CA &quot;, 4) == 0)\r\n        {\r\n            atomNum++;\r\n        }\r\n    }\r\n    return atomNum;\r\n}\r\n \r\nfloat **Make_e(int atomNum)\r\n{\r\n    int     i;\r\n    float **e;\r\n\r\n    e = (float **)malloc((atomNum+1) * sizeof(float *));\r\n    if (e == NULL) {\r\n        fprintf(stderr, &quot;Make_e(): Cannot allocate memory(1)\\n&quot;);\r\n        exit(1);\r\n    }\r\n    for (i = 0; i &lt; atomNum+1; i++) {\r\n        e&#x5B;i] = (float *)malloc(3 * sizeof(float));\r\n        if (e&#x5B;i] == NULL) {\r\n            fprintf(stderr, &quot;Make_e(): Cannot allocate memory(2)\\n&quot;);\r\n            exit(1);\r\n        }\r\n    }\r\n    return e;\r\n}\r\n\r\nvoid Read_e(FILE *fp, int atomNum, float **e)\r\n{\r\n    int     i = 0;\r\n    char    line&#x5B;MAXCHR];\r\n\r\n    while (fgets(line, MAXCHR, fp) != NULL) {\r\n        if (strncmp(line, &quot;ATOM  &quot;, 6) == 0 &amp;&amp;\r\n            strncmp(&amp;line&#x5B;12], &quot; CA &quot;, 4) == 0)\r\n        {\r\n            e&#x5B;i]&#x5B;0] = atof(&amp;line&#x5B;30]);\r\n            e&#x5B;i]&#x5B;1] = atof(&amp;line&#x5B;38]);\r\n            e&#x5B;i]&#x5B;2] = atof(&amp;line&#x5B;46]);\r\n\r\n            i++;\r\n        }\r\n    }\r\n}\r\n\r\nfloat Distance(float e1&#x5B;3], float e2&#x5B;3])\r\n{\r\n    float   dis;\r\n\r\n    dis = pow(e1&#x5B;0] - e2&#x5B;0], 2.0) +\r\n          pow(e1&#x5B;1] - e2&#x5B;1], 2.0) +\r\n          pow(e1&#x5B;2] - e2&#x5B;2], 2.0);\r\n    return sqrt(dis);\r\n}\r\n\r\nvoid PrintDis(int atomNum, float **e)\r\n{\r\n    int     i;\r\n\r\n    for (i = 0; i &lt; atomNum-1; i++) {\r\n        printf(&quot;%4d %5.2f\\n&quot;, i+1, Distance(e&#x5B;i], e&#x5B;i+1]));\r\n    }\r\n}\r\n\r\nint main(int argc, char *argv&#x5B;])\r\n{\r\n    int     atomNum;\r\n    float **e;\r\n    FILE   *fp;\r\n\r\n    if (argc != 2) {\r\n        fprintf(stderr, &quot;Usage: %s  PDB_FILE\\n&quot;, argv&#x5B;0]);\r\n        exit(1);\r\n    }\r\n\r\n    if ((fp = fopen(argv&#x5B;1], &quot;r&quot;)) == NULL) {\r\n        fprintf(stderr, &quot;Cannot open %s\\n&quot;, argv&#x5B;1]);\r\n        exit(1);\r\n    }\r\n\r\n    atomNum = GetAtomNum(fp);\r\n    e = Make_e(atomNum);\r\n    rewind(fp);\r\n    Read_e(fp, atomNum, e);\r\n    PrintDis(atomNum, e);\r\n    return 0;\r\n}\r\n<\/pre>\n<p>\u81ea\u4f5c\u306e\u95a2\u6570\u304c\uff15\u3064\u3042\u308a\u3001\u5c11\u3057\u9577\u3063\u305f\u3089\u3057\u304f\u306a\u3063\u3066\u3057\u307e\u3044\u307e\u3057\u305f\u304c\u3001\u304c\u3093\u3070\u3063\u3066\u5165\u529b\u3057\u3066\u304f\u3060\u3055\u3044\u3002\u5165\u529b\u304c\u7d42\u308f\u3063\u305f\u3089\u3001disCa.c\u3068\u3067\u3082\u540d\u524d\u3092\u3064\u3051\u3066\u4fdd\u5b58\u3057\u3001\u30b3\u30f3\u30d1\u30a4\u30eb\u3057\u307e\u3057\u3087\u3046\u3002\u30b3\u30f3\u30d1\u30a4\u30eb\u306e\u4ed5\u65b9\u306f\u3001<\/p>\n<pre>\r\n cc -o disCa disCa.c -lm\r\n<\/pre>\n<p>\u3067\u3059\u3002<\/p>\n<p>\u6700\u521d\u306bGetAtomNum()\u95a2\u6570\u3092\u4f5c\u3063\u3066\u3044\u307e\u3059\u3002\u3053\u306e\u95a2\u6570\u306f\u3001\u30d5\u30a1\u30a4\u30eb\u30dd\u30a4\u30f3\u30bf\u3092\u6e21\u3059\u3068\u3001\u30d5\u30a1\u30a4\u30eb\u306e\u4e2d\u304b\u3089\u884c\u982d\u304c\"ATOM  \"\u3067\u3042\u308a\u3001\u304b\u3064\u3001\u884c\u306e12\u5217\u76ee\u304b\u3089\" CA \"\u304c\u3042\u308b\u884c\u306e\u6570\u3092\u6570\u3048\u3066\u305d\u308c\u3092\u8fd4\u3057\u3066\u304f\u308c\u308b\u95a2\u6570\u3067\u3059\u3002\u3053\u308c\u306b\u3088\u308a\u3001malloc()\u95a2\u6570\u3067\u78ba\u4fdd\u3059\u3079\u304d\u30e1\u30e2\u30ea\u306e\u5927\u304d\u3055\u3092\u77e5\u308b\u3053\u3068\u304c\u3067\u304d\u307e\u3059\u3002<\/p>\n<p>\u6b21\u306b\u4f5c\u3063\u3066\u3044\u308b\u306e\u304cMake_e()\u95a2\u6570\u3067\u3059\u3002\u3053\u308c\u304c\u4eca\u56de\u306e\u809d\u306b\u306a\u308b\u95a2\u6570\u3067\u3059\u3002\u5f79\u5272\u306f\u3001\u03b1\u70ad\u7d20\u306e\u6570\u3092\u53d7\u3051\u53d6\u3063\u3066\u3001\u305d\u306e\u5206\u306e\u03b1\u70ad\u7d20\u306exyz\u5ea7\u6a19\u3092\u8a18\u9332\u3059\u308b\u305f\u3081\u306e\u30e1\u30e2\u30ea\u3092\u78ba\u4fdd\u3059\u308b\u3001\u3068\u3044\u3046\u3082\u306e\u3067\u3059\u3002\u5148\u307b\u3069\u306e\u30d7\u30ed\u30b0\u30e9\u30e0\u4f8b\u306b\u6bd4\u3079\u308b\u3068\u3001\u540c\u3058malloc()\u95a2\u6570\u3092\u4f7f\u3063\u3066\u3044\u3066\u3082\u8907\u96d1\u306b\u898b\u3048\u307e\u3059\u3002\u8907\u96d1\u306b\u306a\u3063\u3066\u3044\u308b\u539f\u56e0\u306e\u4e00\u3064\u304c\u3001\uff12\u6b21\u5143\u306e\u30e1\u30e2\u30ea\uff08\uff11\u6b21\u5143\u76ee\u304c\u5404\u03b1\u70ad\u7d20\u3001\uff12\u6b21\u5143\u76ee\u304cx\u5ea7\u6a19\u3001y\u5ea7\u6a19\u3001z\u5ea7\u6a19\uff09\u3092\u78ba\u4fdd\u3057\u3066\u3044\u308b\u305f\u3081\u3001\u3082\u3046\u4e00\u3064\u304cmalloc()\u95a2\u6570\u306b\u3088\u308a\u30e1\u30e2\u30ea\u3092\u78ba\u4fdd\u3067\u304d\u306a\u304b\u3063\u305f\u5834\u5408\u306e\u30a8\u30e9\u30fc\u51e6\u7406\u3092\u3057\u3066\u3044\u308b\u305f\u3081\u3067\u3059\u300228\u884c\u76ee\u304b\u308932\u884c\u76ee\u304c\uff11\u6b21\u5143\u76ee\u306e\u30e1\u30e2\u30ea\uff08\u03b1\u70ad\u7d20\u306e\u6570\u306e\u5206\uff09\u306e\u78ba\u4fdd\u306b\u8a72\u5f53\u3057\u300133\u884c\u76ee\u304b\u308939\u884c\u76ee\u304c\uff12\u6b21\u5143\u76ee\u306e\u30e1\u30e2\u30ea\uff08\u305d\u308c\u305e\u308c\u306e\u03b1\u70ad\u7d20\u306b\u3064\u3044\u3066\u306exyz\u5ea7\u6a19\u306e\u5206\uff09\u306e\u78ba\u4fdd\u306b\u8a72\u5f53\u3057\u307e\u3059\u3002\u95a2\u6570\u306e\u6700\u5f8c\u3067\u3001\u30e1\u30e2\u30ea\u3092\u78ba\u4fdd\u3057\u305f\u4e8c\u6b21\u5143\u30dd\u30a4\u30f3\u30bf\u5909\u6570e\u3092return\u3067\u8fd4\u3057\u3066\u3044\u307e\u3059\u3002\u3053\u308c\u306b\u3088\u308a\u3001\u3053\u306e\u95a2\u6570\u306e\u8fd4\u308a\u5024\u3092main()\u95a2\u6570\u3067\u53d7\u3051\u308b\u3068\u3001\u5fc5\u8981\u306a\u5206\u306e\u30e1\u30e2\u30ea\u304c\u78ba\u4fdd\u3055\u308c\u305f\u5909\u6570\u304c\u3064\u304f\u308c\u307e\u3059\u3002\u306a\u304a\u3001\u3053\u306eMake_e()\u95a2\u6570\u306f\u4e8c\u6b21\u5143\u30dd\u30a4\u30f3\u30bf\u3092\u8fd4\u3059\u306e\u3067\u3001\u95a2\u6570\u306e\u5148\u982d\uff0823\u884c\u76ee\uff09\u306b\u304a\u3044\u3066\u3001*\u304c\uff12\u3064\u3064\u3044\u3066\u3044\u307e\u3059\u3002\u3053\u306e\u95a2\u6570\u3067\u3084\u3063\u3066\u3044\u308b\u3053\u3068\u306f\u3001\u30e1\u30e2\u30ea\u3092\u52d5\u7684\u306b\u78ba\u4fdd\u3059\u308b\u5834\u5408\u306b\u3088\u304f\u4f7f\u308f\u308c\u308b\u30d1\u30bf\u30fc\u30f3\u3060\u3068\u601d\u3044\u307e\u3059\u3002\u6700\u521d\u306f\u6163\u308c\u306a\u3044\u3068\u601d\u3044\u307e\u3059\u304c\u3001\u3053\u3046\u3044\u3046\u3082\u306e\u3060\u3068\u601d\u3063\u3066\u5f62\u5f0f\u3060\u3051\u3067\u3082\u899a\u3048\u3066\u304f\u3060\u3055\u3044\u3002<\/p>\n<p>Read_e()\u95a2\u6570\u3001Distance()\u95a2\u6570\u306b\u3064\u3044\u3066\u306f\u65b0\u3057\u3044\u8981\u7d20\u306f\u3042\u308a\u307e\u305b\u3093\u3002\u524d\u56de\u306e\u8aac\u660e\u306e\u3068\u3053\u308d\u3092\u53c2\u8003\u306b\u3057\u3066\u304f\u3060\u3055\u3044\u3002<\/p>\n<p>\u6700\u5f8c\u306b\u3001PrintDis()\u95a2\u6570\u3067\u3059\u304c\u3001\u914d\u5217\u4e0a\u96a3\u308a\u5408\u3063\u305f\u03b1\u70ad\u7d20\u9593\u306e\u8ddd\u96e2\u3092\u8a08\u7b97\u3059\u308b\u306e\u3067\u3001i\u756a\u76ee\u306e\u03b1\u70ad\u7d20\u3068i+1\u756a\u76ee\u306e\u03b1\u70ad\u7d20\u306e\u5ea7\u6a19\u3092Distance()\u95a2\u6570\u306b\u6e21\u3059\u3088\u3046\u306b\u3057\u3066\u3044\u307e\u3059\u3002<\/p>\n<h2>\u7df4\u7fd2\u554f\u984c<\/h2>\n<ol>\n<li>\u7b2c\uff19\u56de\u306ehydropathy plot\u3092\u6c42\u3081\u308b\u30d7\u30ed\u30b0\u30e9\u30e0\u306b\u3064\u3044\u3066\u3001\u30a2\u30df\u30ce\u9178\u914d\u5217\u306e\u30c7\u30fc\u30bf\u3092\u683c\u7d0d\u3059\u308bchar\u578b\u5909\u6570\u306e\u30e1\u30e2\u30ea\u3092\u3001malloc()\u95a2\u6570\u3092\u4f7f\u3063\u3066\u78ba\u4fdd\u3059\u308b\u3088\u3046\u30d7\u30ed\u30b0\u30e9\u30e0\u3092\u5909\u66f4\u3057\u306a\u3055\u3044\u3002<\/li>\n<li>\u7b2c\uff11\uff10\u56de\u306e\u63a5\u89e6\u539f\u5b50\u306e\u8a08\u7b97\u3092\u884c\u3046\u30d7\u30ed\u30b0\u30e9\u30e0\u306b\u3064\u3044\u3066\u3001\u539f\u5b50\u5ea7\u6a19\u306e\u30c7\u30fc\u30bf\u3092\u683c\u7d0d\u3059\u308b\u69cb\u9020\u4f53\u306e\u30e1\u30e2\u30ea\u3092\u3001malloc()\u95a2\u6570\u3092\u4f7f\u3063\u3066\u78ba\u4fdd\u3059\u308b\u3088\u3046\u30d7\u30ed\u30b0\u30e9\u30e0\u3092\u5909\u66f4\u3057\u306a\u3055\u3044\u3002<\/li>\n<\/ol>\n<p>\uff12\u3064\u306e\u7df4\u7fd2\u554f\u984c\u5171\u306b\u3001\u914d\u5217\u3067\u5ba3\u8a00\u3057\u3066\u3044\u308b\u3068\u3053\u308d\u3092\u30dd\u30a4\u30f3\u30bf\u306b\u5909\u66f4\u3059\u308b\u5fc5\u8981\u304c\u3042\u308a\u307e\u3059\u3002\u7279\u306b\u95a2\u6570\u306e\u5f15\u6570\u306e\u3068\u3053\u308d\u3092\u5909\u66f4\u3059\u308b\u3053\u3068\u3092\u5fd8\u308c\u306a\u3044\u3088\u3046\u306b\u3057\u3066\u304f\u3060\u3055\u3044\u3002<\/p>\n","protected":false},"excerpt":{"rendered":"<p>\u30e1\u30e2\u30ea\u306e\u52d5\u7684\u78ba\u4fdd \u524d\u56de\u3001\u524d\u3005\u56de\u306b\u4f5c\u3063\u305f\u30d7\u30ed\u30b0\u30e9\u30e0\u306f\u3001\u8aad\u307f\u8fbc\u3081\u308b\u30c7\u30fc\u30bf\u306e\u4e0a\u9650\u3092\u306f\u3058\u3081\u304b\u3089\u6c7a\u3081\u3066\u3044\u307e\u3057\u305f\uff08\u63a5\u89e6\u539f\u5b50\u306e\u8a08\u7b97\u3067\u306f5000\u539f\u5b50\u307e\u3067\u3001hydropathy plot\u3067\u306f2000\u30a2\u30df\u30ce\u9178\u6b8b\u57fa\u307e\u3067\uff09\u3002\u6271\u3063\u3066\u3044\u308b\u30c7\u30fc\u30bf\u304c\u3042 [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":96,"menu_order":11,"comment_status":"closed","ping_status":"closed","template":"","meta":{"vkexunit_cta_each_option":"","footnotes":""},"class_list":["post-162","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/pages\/162","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=162"}],"version-history":[{"count":5,"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/pages\/162\/revisions"}],"predecessor-version":[{"id":189,"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/pages\/162\/revisions\/189"}],"up":[{"embeddable":true,"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=\/wp\/v2\/pages\/96"}],"wp:attachment":[{"href":"https:\/\/b-lab.nagahama-i-bio.ac.jp\/~m_shionyu\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=162"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}